STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527115_04012Unannotated protein. (490 aa)    
Predicted Functional Partners:
GCA_000527115_04011
Unannotated protein.
 
     0.755
GCA_000527115_03987
Unannotated protein.
   
  
 0.667
GCA_000527115_02248
Unannotated protein.
  
 
 0.666
GCA_000527115_04010
Unannotated protein.
     
 0.606
GCA_000527115_00525
Unannotated protein.
  
  
 0.551
GCA_000527115_02516
Unannotated protein.
     
 0.539
GCA_000527115_02585
Unannotated protein.
    
  0.484
GCA_000527115_02843
Unannotated protein.
 
     0.471
GCA_000527115_04007
Unannotated protein.
     
 0.425
GCA_000527115_04008
Unannotated protein.
       0.411
Your Current Organism:
Methylosinus sp. LW3
NCBI taxonomy Id: 107635
Other names: M. sp. LW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.