STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NirDUnannotated protein. (126 aa)    
Predicted Functional Partners:
GCA_000702925_01101
Unannotated protein.
 0.999
GCA_000702925_01219
Unannotated protein.
 0.999
GCA_000702925_01100
Unannotated protein.
 
 
 0.978
GCA_000702925_01220
Unannotated protein.
 
 
 0.955
GCA_000702925_03016
Unannotated protein.
 
 
 0.955
GCA_000702925_00257
Unannotated protein.
     
 0.912
GCA_000702925_04412
Unannotated protein.
    
  0.901
GCA_000702925_01626
Unannotated protein.
   
 
  0.900
GCA_000702925_02502
Unannotated protein.
     
  0.900
GCA_000702925_02503
Unannotated protein.
     
  0.900
Your Current Organism:
Methylomonas sp. LW13
NCBI taxonomy Id: 107637
Other names: M. sp. LW13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.