STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702925_01576Unannotated protein. (550 aa)    
Predicted Functional Partners:
GCA_000702925_01575
Unannotated protein.
 
 
 0.980
GspF
Unannotated protein.
 
 
 0.911
GCA_000702925_04710
Unannotated protein.
 
 
 0.911
GCA_000702925_00710
Unannotated protein.
 
 
 0.910
GCA_000702925_00711
Unannotated protein.
 
 
 0.832
GCA_000702925_01574
Unannotated protein.
       0.773
GCA_000702925_01577
Unannotated protein.
       0.773
GCA_000702925_01578
Unannotated protein.
       0.773
GCA_000702925_04124
Unannotated protein.
  
 
 0.750
GCA_000702925_01580
Unannotated protein.
 
 
 0.690
Your Current Organism:
Methylomonas sp. LW13
NCBI taxonomy Id: 107637
Other names: M. sp. LW13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.