STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427505_02847Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_000427505_02846
Unannotated protein.
       0.800
GCA_000427505_00003
Unannotated protein.
    
  0.719
GCA_000427505_01700
Unannotated protein.
    
  0.717
GCA_000427505_02914
Unannotated protein.
   
 
 0.710
GCA_000427505_03236
Unannotated protein.
   
 
 0.710
GCA_000427505_00891
Unannotated protein.
    
  0.707
GCA_000427505_00992
Unannotated protein.
    
 0.699
GCA_000427505_02742
Unannotated protein.
    
  0.681
GCA_000427505_00192
Unannotated protein.
  
 
  0.665
GCA_000427505_01645
Unannotated protein.
    
 0.579
Your Current Organism:
Rhodanobacter sp. OR444
NCBI taxonomy Id: 1076525
Other names: R. sp. OR444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.