STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIR86714.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (773 aa)    
Predicted Functional Partners:
AIR86717.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
AIR86711.1
3-hydroxy-fatty acyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.959
AIR86715.1
Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.959
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
   
 0.957
AIR86722.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.956
AIR86718.1
hydroxymyristoyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
AIR86719.1
AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
AIR86720.1
DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
AIR86713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.954
AIR86716.1
4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.954
Your Current Organism:
Pantoea rwandensis
NCBI taxonomy Id: 1076550
Other names: BCC 571, DSM 105076, Kluyvera sp. ND04, LMG 26275, LMG:26275, P. rwandensis, Pantoea rwandensis Brady et al. 2012, strain BD 944
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