STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDEL0C01170PseudoU_synth_1 domain-containing protein. (437 aa)    
Predicted Functional Partners:
TDEL0F02550
Tryptophan synthase.
     
 0.790
TDEL0E00760
TruB_N domain-containing protein.
   
 0.778
TDEL0A06170
TRUD domain-containing protein.
   
 
 0.756
TDEL0D04680
Uncharacterized protein.
  
  
 0.734
TDEL0F04790
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.731
TDEL0D01820
Mrpl_C domain-containing protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.719
TDEL0F00290
Glutamine amidotransferase type-1 domain-containing protein.
     
 0.713
TDEL0D05200
SAM-dependent MTase TRM10-type domain-containing protein.
   
 
 0.686
TDEL0B05950
PUA domain-containing protein.
   
 0.677
TDEL0C06900
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 
 0.665
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 1076872
Other names: T. delbrueckii CBS 1146, Torulaspora delbrueckii CBS 1146
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