STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF24879.1Hypothetical protein. (436 aa)    
Predicted Functional Partners:
SFF24849.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
       0.554
SFF24865.1
Cytochrome b561.
       0.554
SFF58698.1
Protein of unknown function.
  
     0.467
SFF24828.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
       0.453
SFF54981.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.435
SFF54970.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
     0.419
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.