STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF23121.1Uncharacterized membrane protein YfcA. (246 aa)    
Predicted Functional Partners:
SFF23099.1
Uncharacterized domain 1-containing protein.
       0.774
SFF23140.1
EF hand.
       0.773
SFF55016.1
Trypsin-like peptidase domain-containing protein.
  
     0.686
SFF23162.1
Magnesium transporter.
       0.678
SFF63477.1
Penicillin amidase.
  
     0.613
SFF50962.1
Lysophospholipase, alpha-beta hydrolase superfamily.
  
     0.601
SFF40639.1
Ketopantoate reductase.
 
     0.576
SFF56706.1
Uncharacterized conserved protein, DUF305 family.
  
     0.570
SFF42360.1
Hypothetical protein.
  
     0.562
SFF54958.1
X-Pro dipeptidyl-peptidase (S15 family).
  
     0.504
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.