STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF44399.1Protein of unknown function. (663 aa)    
Predicted Functional Partners:
SFF44407.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
  
 0.996
SFF44418.1
MoxR-like ATPase.
 
   
 0.934
SFF23582.1
Type IV pilus assembly protein PilO.
  
     0.742
SFF22821.1
LysM domain-containing protein.
  
     0.737
SFF23561.1
Type IV pilus assembly protein PilN.
  
     0.737
SFF23603.1
Type IV pilus assembly protein PilP.
  
     0.735
SFF32637.1
Type IV pilus assembly protein PilZ.
  
     0.718
SFF31311.1
Pilus assembly protein FimV.
  
     0.695
SFF38432.1
Signal transduction histidine kinase.
  
     0.662
SFF23539.1
Type IV pilus assembly protein PilM.
  
     0.658
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.