STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF49301.1Alcohol dehydrogenase. (375 aa)    
Predicted Functional Partners:
SFF25939.1
Alcohol dehydrogenase, class IV.
    
 0.982
SFF44762.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 
0.941
SFF67989.1
Quinohemoprotein ethanol dehydrogenase.
    
 0.854
SFF49291.1
acyl-CoA thioester hydrolase.
 
     0.841
SFF34722.1
DNA-binding transcriptional regulator, FrmR family.
  
  
 0.820
SFF52818.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.801
tadA
tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.796
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
    
 0.654
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
  
 0.628
SFF51197.1
Uncharacterized conserved protein.
    
 0.613
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
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