STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF54736.1Twitching motility two-component system response regulator PilH. (121 aa)    
Predicted Functional Partners:
SFF61899.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
 0.998
SFF44160.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
  
 0.981
SFF39954.1
PAS domain S-box-containing protein.
 
 0.977
SFF62802.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.975
SFF54726.1
Twitching motility protein PilJ.
 
  0.970
nuoC
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
   0.962
SFF32776.1
Adenylate cyclase, class 3.
  
 0.958
SFF37459.1
Signal transduction histidine kinase.
 
 0.930
SFF54878.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
0.925
SFF22880.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.899
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
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