STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF59855.1Response regulator receiver domain-containing protein. (111 aa)    
Predicted Functional Partners:
SFF61899.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
 
 0.997
SFF62802.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.922
SFF32776.1
Adenylate cyclase, class 3.
  
 0.867
SFF37459.1
Signal transduction histidine kinase.
  
 
 0.864
SFF44160.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
  
 0.828
SFF39954.1
PAS domain S-box-containing protein.
 
 
 0.800
SFF44541.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 
 0.792
SFF38787.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.788
SFF54878.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
0.773
SFF59867.1
Hypothetical protein.
       0.762
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.