STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF60669.1Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family. (144 aa)    
Predicted Functional Partners:
SFF66072.1
Type IV pilus assembly protein PilE.
 
  
 0.829
SFF60683.1
Hypothetical protein.
 
     0.739
SFF60697.1
Hypothetical protein.
 
     0.719
SFF23628.1
Type IV pilus assembly protein PilQ.
 
   
 0.704
SFF60710.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.515
SFF60724.1
Hypothetical protein.
       0.515
SFF60743.1
2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase.
       0.515
SFF32469.1
General secretion pathway protein G.
   
 0.513
SFF32447.1
General secretion pathway protein I.
   
 0.487
SFF32457.1
General secretion pathway protein H.
   
 0.487
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
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