STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF64481.1CRISPR-associated protein Csx17. (790 aa)    
Predicted Functional Partners:
SFF64455.1
CRISPR-associated endonuclease/helicase Cas3.
       0.790
SFF64444.1
DNA recombination protein RmuC.
       0.773
SFF64468.1
Hypothetical protein.
       0.773
SFF64493.1
CRISPR-associated protein Csb1.
       0.762
SFF64507.1
CRISPR-associated protein Csb2.
       0.681
SFF64407.1
3(or 17)beta-hydroxysteroid dehydrogenase.
       0.441
SFF64421.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
       0.441
SFF64432.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.441
Your Current Organism:
Fontimonas thermophila
NCBI taxonomy Id: 1076937
Other names: CCUG 59713, DSM 23609, F. thermophila, Fontimonas thermophila Losey et al. 2013, Solimonas sp. HA-01, strain HA-01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.