STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSI_02585DDE-1 domain-containing protein. (522 aa)    
Predicted Functional Partners:
GSI_10772
Uncharacterized protein.
    
 
 0.955
GSI_13997
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.954
GSI_15023
Uncharacterized protein.
    
   0.947
GSI_13764
Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.
    
   0.947
GSI_13982
Uncharacterized protein; Belongs to the SKP1 family.
    
 
 0.903
GSI_14227
Uncharacterized protein.
    
 
 0.903
GSI_10733
Uncharacterized protein.
    
 
 0.878
GSI_14174
Uncharacterized protein.
    
 
 0.846
GSI_14176
Uncharacterized protein.
    
 
 0.846
GSI_02981
Transporter; Belongs to the protein kinase superfamily.
    
 
 0.830
Your Current Organism:
Ganoderma sinense
NCBI taxonomy Id: 1077348
Other names: G. sinense ZZ0214-1, Ganoderma sinense ZZ0214-1
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