STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ55501.1Periplasmic chaperone for outer membrane proteins SurA. (457 aa)    
Predicted Functional Partners:
SIR32768.1
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family.
  
 0.913
SIQ54585.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.908
SIR09192.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
  
 0.908
SIQ49998.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.895
SIQ55523.1
MoxR-like ATPase.
       0.801
SIQ55477.1
Peptidyl-prolyl cis-trans isomerase SurA.
 
   
0.755
SIR48264.1
Beta-barrel assembly machine subunit BamA.
  
 
 0.739
yidC
YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
  
 0.602
SIQ53905.1
Protein of unknown function.
  
     0.593
SIQ51727.1
Hypothetical protein.
 
  
 0.583
Your Current Organism:
Pontibacter lucknowensis
NCBI taxonomy Id: 1077936
Other names: CCM 7955, MTCC 11079, P. lucknowensis, Pontibacter lucknowensis Dwivedi et al. 2013, Pontibacter sp. DM9, strain DM9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.