STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR26713.1Outer membrane receptor proteins, mostly Fe transport. (822 aa)    
Predicted Functional Partners:
SIQ96049.1
TonB family C-terminal domain-containing protein.
  
   0.588
SIR48376.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.562
SIQ83109.1
TonB-linked outer membrane protein, SusC/RagA family.
  
    0.543
SIR11079.1
TonB family C-terminal domain-containing protein.
  
   0.533
SIQ51435.1
Protein of unknown function.
  
     0.522
SIR48386.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.522
SIR26735.1
Hypothetical protein.
       0.516
SIR41084.1
TonB family C-terminal domain-containing protein.
  
   0.509
SIQ83627.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
 
0.474
SIR25908.1
Hypothetical protein.
    
 
 0.462
Your Current Organism:
Pontibacter lucknowensis
NCBI taxonomy Id: 1077936
Other names: CCM 7955, MTCC 11079, P. lucknowensis, Pontibacter lucknowensis Dwivedi et al. 2013, Pontibacter sp. DM9, strain DM9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.