STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM69956.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. (400 aa)    
Predicted Functional Partners:
SEN48576.1
Formate dehydrogenase alpha subunit.
 
 
 0.984
SEN70853.1
Reductive dehalogenase.
  
 
 0.866
SEN45357.1
Ferredoxin, 2Fe-2S.
 
 
 0.860
SEM69985.1
16S rRNA (guanine966-N2)-methyltransferase.
       0.854
SEN91180.1
Sulfite reductase (NADPH) hemoprotein beta-component.
  
 0.791
SEM70045.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
       0.789
SEM70015.1
Hypothetical protein.
       0.773
SEM70266.1
2,4-dienoyl-CoA reductase (NADPH2).
    
 0.767
SEM96696.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.741
SEO07606.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.741
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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