STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM71274.1Alpha-galactosidase. (695 aa)    
Predicted Functional Partners:
SEM71140.1
Beta-galactosidase.
 
  
 0.995
SEM71300.1
Multiple sugar transport system permease protein.
 
    0.959
SEM71325.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
    0.935
SEM71353.1
Multiple sugar transport system substrate-binding protein.
 
    0.923
SEN16690.1
Aldose 1-epimerase.
 
 
  0.898
SEM82996.1
Alpha-glucosidase.
  
 
 0.896
SEM71169.1
Sugar lactone lactonase YvrE.
 
     0.872
SEM71249.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  
  0.867
SEM71198.1
2-keto-3-deoxy-phosphogalactonate aldolase.
       0.854
SEM71221.1
2-keto-3-deoxygalactonate kinase.
       0.854
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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