STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM92680.1Chromosome partitioning protein, ParB family. (280 aa)    
Predicted Functional Partners:
SEN49220.1
Cellulose biosynthesis protein BcsQ.
 
 0.935
SEO22272.1
Chromosome partitioning protein.
 
 0.874
SEM76697.1
Chromosome partitioning protein.
   
 
 0.707
SEM88534.1
Chromosome segregation ATPase.
   
 
 0.684
SEO22317.1
Replication initiation protein RepC.
  
     0.604
SEM92655.1
SPFH domain, Band 7 family protein.
  
    0.555
SEM92616.1
Hypothetical protein.
       0.554
SEM70957.1
Hypothetical protein.
  
     0.539
SEO22296.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
     0.535
SEO16621.1
Ribosomal protein S18 acetylase RimI.
  
     0.434
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.