STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM98422.1Polysaccharide export outer membrane protein. (382 aa)    
Predicted Functional Partners:
SEO08092.1
Hypothetical protein.
  
 0.994
SEM98390.1
Capsular polysaccharide export protein.
 
  
 0.970
SEN97287.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.918
SEO08126.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.898
SEM98455.1
Capsular polysaccharide export protein.
 
   
 0.897
SEN96423.1
Capsular polysaccharide transport system permease protein.
 
  
 0.890
SEN97265.1
Capsular polysaccharide transport system permease protein.
 
  
 0.883
SEN96401.1
Capsular polysaccharide transport system permease protein.
 
  
 0.823
SEN31497.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.815
SEN39892.1
Hypothetical protein.
  
     0.740
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.