STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN03620.1Head-tail adaptor. (112 aa)    
Predicted Functional Partners:
SEN03600.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
 0.998
SEN03651.1
Protein of unknown function.
 
 
   0.998
SEN03573.1
Phage major capsid protein, HK97 family.
 
 
 0.995
SEN03683.1
Phage major tail protein, TP901-1 family.
 
 
   0.995
SEN03802.1
TIGR02217 family protein.
 
 
 
 0.995
SEN03831.1
Phage conserved hypothetical protein BR0599.
 
 
 
 0.995
SEN03491.1
Phage portal protein, HK97 family.
 
   0.993
SEN03894.1
Putative phage tail protein.
 
 
   0.993
SEN03716.1
Phage tail tube protein, GTA-gp10.
 
     0.942
SEN03767.1
Phage tail tape measure protein, lambda family.
 
     0.942
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.