STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN02934.1Hint domain-containing protein. (159 aa)    
Predicted Functional Partners:
SEN40356.1
Hint domain-containing protein.
  
  0.817
SEN03253.1
Hint domain-containing protein.
  
  0.771
SEN21055.1
Nidogen-like.
  
  0.759
SEN39257.1
Hint domain-containing protein.
  
     0.746
SEN31288.1
Core-2/I-Branching enzyme.
  
     0.744
SEN20932.1
Pectate lyase superfamily protein.
  
 
   0.710
SEN39239.1
Hint domain-containing protein.
  
     0.703
SEM69157.1
Cell division transport system permease protein.
  
     0.700
SEM98207.1
Hypothetical protein.
  
     0.691
SEN45396.1
Putative peptidoglycan binding domain-containing protein.
  
     0.673
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.