STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN32088.1Protein of unknown function. (189 aa)    
Predicted Functional Partners:
SEN32057.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
 
 0.987
SEN32029.1
Hypothetical protein.
 
  
 0.978
SEN32123.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
 
    0.976
SEN31997.1
Hypothetical protein.
 
   
 0.966
SEN31917.1
anti-ECFsigma factor, ChrR.
 
   
 0.868
SEO01997.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.694
SEN31956.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.680
SEN10160.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.537
SEN85988.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.537
SEN90568.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.537
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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