STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN67588.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
SEN67492.1
Hypothetical protein.
       0.773
SEN67524.1
Hypothetical protein.
       0.773
SEN67559.1
Chitinase class I.
       0.773
SEN67625.1
Hypothetical protein.
       0.773
SEN67655.1
Hypothetical protein.
       0.773
SEN67692.1
Hypothetical protein.
       0.773
SEN67728.1
Hypothetical protein.
       0.410
SEN67764.1
Phage Tail Collar Domain.
       0.410
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.