STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN89652.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (596 aa)    
Predicted Functional Partners:
SEN89570.1
Peptide/nickel transport system permease protein.
 
  0.984
SEN89436.1
Peptide/nickel transport system permease protein.
 
  0.965
SEN89702.1
Peptide/nickel transport system permease protein.
 
 
  0.961
SEN43576.1
Peptide/nickel transport system permease protein.
 
 
  0.938
SEN47349.1
Peptide/nickel transport system permease protein.
 
 
  0.934
SEN41510.1
Peptide/nickel transport system permease protein.
 
 
  0.914
SEN89589.1
Peptide/nickel transport system permease protein.
 
  0.901
SEN75187.1
Peptide/nickel transport system permease protein.
 
 
  0.894
SEN89618.1
Peptide/nickel transport system substrate-binding protein.
 
 
  0.880
SEN89648.1
Amidase.
 
     0.807
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.