STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN97896.1Virulence factor. (98 aa)    
Predicted Functional Partners:
SEN97876.1
Methylenetetrahydrofolate reductase (NADPH).
 
    0.942
SEN97851.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
     0.938
SEN74954.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
     0.855
SEN77403.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
    0.814
SEN77244.1
Protein of unknown function.
 
     0.805
SEN77429.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
    0.794
SEN84503.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
 
     0.783
SEN27409.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
 
     0.777
SEN08395.1
Hypothetical protein.
  
     0.698
SEN97913.1
Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase.
       0.651
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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