STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN97323.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
SEN40957.1
Hypothetical protein.
  
     0.771
SEM85505.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
     0.767
SEN25836.1
Hypothetical protein.
  
     0.767
SEN56809.1
Rhomboid family protein.
  
     0.765
SEN36560.1
Hypothetical protein.
  
     0.764
SEN59814.1
Hypothetical protein.
  
     0.763
SEM68324.1
Hypothetical protein.
  
     0.757
SEN80120.1
Exodeoxyribonuclease-5.
  
     0.754
SEN75891.1
Hypothetical protein.
  
     0.747
SEN71335.1
DNA polymerase III, delta subunit.
  
     0.737
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.