STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO32325.1NADP-dependent alcohol dehydrogenase. (366 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.896
SEO32357.1
Transcriptional regulator, TetR family.
 
     0.678
SEN79187.1
Predicted oxidoreductase.
  
 
 0.645
SEO17923.1
4-hydroxybutyrate dehydrogenase/hypothetical protein.
  
  
0.640
SEO17144.1
Putative NADH-flavin reductase.
  
  
 0.568
SEN99709.1
Hypothetical protein.
   
    0.513
SEM86104.1
Transcriptional regulator, AraC family with amidase-like domain.
   
    0.512
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
     0.480
SEN64832.1
GMP synthase (glutamine-hydrolysing).
  
    0.413
SEN15189.1
L-glyceraldehyde 3-phosphate reductase.
  
 
 0.412
Your Current Organism:
Pseudorhodobacter antarcticus
NCBI taxonomy Id: 1077947
Other names: CGMCC 1.10836, KCTC 23700, P. antarcticus, Pseudorhodobacter antarcticus Chen et al. 2013, Pseudorhodobacter sp. ZS3-33, Rhodobacter sp. ZS3-33, strain ZS3-33
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