STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB14693.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
rpiB-5
Ribose-5-phosphate isomerase B.
       0.664
GAB14692.1
Putative DNA glycosylase; Belongs to the FPG family.
       0.664
GAB13752.1
Hypothetical protein.
  
     0.619
GAB14645.1
Hypothetical protein.
  
     0.448
GAB14690.1
Hypothetical protein.
       0.435
GAB12021.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Arthrobacter globiformis
NCBI taxonomy Id: 1077972
Other names: A. globiformis NBRC 12137, Arthrobacter globiformis NBRC 12137, Arthrobacter globiformis str. NBRC 12137, Arthrobacter globiformis strain NBRC 12137
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