STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB17487.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
GAB17488.1
Hypothetical protein.
 
    
0.823
GAB17486.1
Hypothetical protein.
       0.774
GAB16849.1
Hypothetical protein.
  
     0.758
GAB16811.1
Hypothetical protein.
  
     0.752
GAB17322.1
Hypothetical protein.
  
     0.752
GAB17923.1
Hypothetical protein.
  
     0.750
GAB19177.1
Hypothetical protein.
  
     0.750
GAB17485.1
Putative hydrolase.
       0.748
GAB16831.1
Hypothetical protein.
  
     0.746
GAB20473.1
Hypothetical protein.
  
     0.746
Your Current Organism:
Gordonia effusa
NCBI taxonomy Id: 1077974
Other names: G. effusa NBRC 100432, Gordonia effusa NBRC 100432, Gordonia effusa str. NBRC 100432, Gordonia effusa strain NBRC 100432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.