STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagAN-acetylglucosamine-6-phosphate deacetylase. (389 aa)    
Predicted Functional Partners:
GAB19777.1
Hypothetical protein.
 
  
 0.969
GAB19778.1
Putative sugar isomerase.
  
 
 0.969
iolT
Myo-inositol transporter IolT; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
 0.953
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 0.926
GAB19111.1
Hypothetical protein.
  
 0.926
GAB17954.1
Putative fructose-specific phosphotransferase system enzyme II.
 
   
 0.912
GAB19775.1
Putative GntR family transcriptional regulator.
 
  
 0.888
GAB17373.1
Hypothetical protein.
 
  
 0.846
glmS
Glucosamine-6-phosphate synthase.
    
 0.818
glmS-2
Glucosamine-6-phosphate synthase.
    
 0.818
Your Current Organism:
Gordonia effusa
NCBI taxonomy Id: 1077974
Other names: G. effusa NBRC 100432, Gordonia effusa NBRC 100432, Gordonia effusa str. NBRC 100432, Gordonia effusa strain NBRC 100432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.