STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD50280.1Diguanylate cyclase (GGDEF) domain-containing protein. (317 aa)    
Predicted Functional Partners:
EPD50279.1
Hypothetical protein.
 
 0.991
EPD51270.1
PAS domain S-box protein.
 0.988
EPD53964.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.950
EPD51203.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
  0.811
EPD51335.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.810
EPD52311.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.786
EPD52198.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.751
EPD52296.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
     0.745
EPD52309.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.740
EPD54271.1
Diguanylate cyclase (GGDEF) domain-containing protein.
0.644
Your Current Organism:
Paenisporosarcina sp. HGH0030
NCBI taxonomy Id: 1078085
Other names: P. sp. HGH0030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.