STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD66526.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
EPD66529.1
Hypothetical protein.
 
 
 0.946
EPD66530.1
Hypothetical protein.
 
   
 0.941
EPD66531.1
Hypothetical protein.
 
  
  0.897
EPD68180.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.895
EPD66766.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.895
EPD66534.1
Hypothetical protein.
 
   
 0.872
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
  0.868
EPD58668.1
Hypothetical protein.
   
  0.866
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
  0.863
EPD68178.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.850
Your Current Organism:
Streptomyces sp. HGB0020
NCBI taxonomy Id: 1078086
Other names: S. sp. HGB0020
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.