STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD62321.1Hypothetical protein. (856 aa)    
Predicted Functional Partners:
EPD62322.1
Hypothetical protein.
 
 
 0.907
EPD62373.1
Hypothetical protein.
 
 
 0.636
EPD63242.1
Hypothetical protein.
 
 
 0.612
EPD56762.1
Hypothetical protein.
 
 
 0.607
EPD56785.1
Hypothetical protein.
 
 
 0.599
EPD66600.1
Hypothetical protein.
 
 
 0.589
EPD63241.1
Hypothetical protein.
 
 
 
0.528
EPD69664.1
Hypothetical protein.
 
 
 0.526
EPD60510.1
Hypothetical protein.
 
 
 0.523
EPD60968.1
Hypothetical protein.
 
 
 0.516
Your Current Organism:
Streptomyces sp. HGB0020
NCBI taxonomy Id: 1078086
Other names: S. sp. HGB0020
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.