STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD57072.1Hypothetical protein. (375 aa)    
Predicted Functional Partners:
EPD57672.1
Hypothetical protein.
    
 0.824
EPD63644.1
Hypothetical protein.
  
  
 
0.785
EPD62854.1
Hypothetical protein.
  
 
 0.738
EPD58979.1
Hypothetical protein.
    
  0.705
EPD55065.1
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.703
EPD62879.1
Hypothetical protein.
  
  
 
0.587
EPD62853.1
Hypothetical protein.
   
 
 0.549
EPD57809.1
Hypothetical protein.
   
 
 0.549
groL-3
Chaperonin 2; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.493
EPD57124.1
Hypothetical protein.
   
    0.461
Your Current Organism:
Streptomyces sp. HGB0020
NCBI taxonomy Id: 1078086
Other names: S. sp. HGB0020
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.