STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD88839.1Hypothetical protein. (457 aa)    
Predicted Functional Partners:
EPD88841.1
Hypothetical protein.
  
 0.970
EPD82198.1
Hypothetical protein.
  
 0.959
EPD82374.1
Efflux transporter, RND family, MFP subunit.
  
 0.959
EPD92244.1
Efflux transporter, RND family, MFP subunit.
  
 0.939
EPD80991.1
Efflux transporter, RND family, MFP subunit.
  
 0.939
EPD81128.1
Hypothetical protein.
  
 0.939
EPD88115.1
Hypothetical protein.
  
 0.874
EPD81825.1
Hypothetical protein.
  
 0.874
EPD92245.1
Hypothetical protein.
  
 0.833
EPD88189.1
Hypothetical protein.
  
 0.833
Your Current Organism:
Paenibacillus sp. HGH0039
NCBI taxonomy Id: 1078505
Other names: P. sp. HGH0039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.