STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD82831.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
EPD85940.1
Hypothetical protein.
   
  0.834
EPD82830.1
Hypothetical protein.
       0.758
EPD82829.1
Hypothetical protein.
       0.675
EPD82828.1
Hypothetical protein.
       0.667
EPD89026.1
Hypothetical protein.
   
 
  0.644
EPD83882.1
Hypothetical protein.
   
 
  0.644
EPD89027.1
Glycine betaine/L-proline transport ATP binding subunit.
   
 
  0.502
EPD88795.1
Hypothetical protein.
   
 
  0.502
EPD88405.1
Hypothetical protein.
   
 
  0.502
EPD81909.1
Polyamine ABC transporter, ATP-binding protein.
   
 
  0.502
Your Current Organism:
Paenibacillus sp. HGH0039
NCBI taxonomy Id: 1078505
Other names: P. sp. HGH0039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.