STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU88238.1GntR family transcriptional regulator. (246 aa)    
Predicted Functional Partners:
lldD-3
L-lactate dehydrogenase protein; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
  
  
 0.739
ALU89950.1
GntR family transcription regulator protein.
  
  
 0.732
ALU89594.1
GntR-family transcriptional regulator.
  
    0.713
ALU91318.1
GntR family transcription regulator protein.
  
  
 0.694
ALU88925.1
GntR transcription regulator protein.
  
  
 0.676
ALU90169.1
GntR family transcription regulator protein.
  
    0.661
ALU91684.1
Transcription regulator protein.
  
    0.654
ALU90609.1
GntR family transcription regulator protein.
  
  
 0.619
ALU89388.1
GntR family transcription regulator protein.
  
  
 0.606
ALU88438.1
GntR family transcriptional regulator protein.
  
  
 0.583
Your Current Organism:
Herbaspirillum rubrisubalbicans
NCBI taxonomy Id: 1078773
Other names: H. rubrisubalbicans M1, Herbaspirillum rubrisubalbicans M1, Herbaspirillum rubrisubalbicans str. M1, Herbaspirillum rubrisubalbicans strain M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.