STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384075_00947Unannotated protein. (581 aa)    
Predicted Functional Partners:
GCA_000384075_03137
Unannotated protein.
  
    0.778
GCA_000384075_00948
Unannotated protein.
       0.773
GCA_000384075_00945
Unannotated protein.
       0.757
GCA_000384075_00946
Unannotated protein.
       0.757
GCA_000384075_03130
Unannotated protein.
  
  
 0.749
GCA_000384075_03131
Unannotated protein.
  
  
 0.749
GCA_000384075_00944
Unannotated protein.
    
 0.682
GCA_000384075_00930
Unannotated protein.
 
     0.672
GCA_000384075_00942
Unannotated protein.
       0.521
GCA_000384075_00943
Unannotated protein.
       0.521
Your Current Organism:
Methylovulum miyakonense
NCBI taxonomy Id: 1078846
Other names: M. miyakonense HT12, Methylococcaceae bacterium HT12, Methylovulum miyakonense HT12, Methylovulum miyakonense str. HT12, Methylovulum miyakonense strain HT12
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.