STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384075_01357Unannotated protein. (237 aa)    
Predicted Functional Partners:
GCA_000384075_01544
Unannotated protein.
 
 
 0.956
GCA_000384075_01545
Unannotated protein.
 
 
 0.951
GCA_000384075_00863
Unannotated protein.
 
  
 0.824
GCA_000384075_01369
Unannotated protein.
 
 
 0.823
GCA_000384075_01371
Unannotated protein.
 
 
 0.823
GCA_000384075_00862
Unannotated protein.
 
  
 0.819
GCA_000384075_01358
Unannotated protein.
 
     0.817
GCA_000384075_01356
Unannotated protein.
 
  
 0.814
GCA_000384075_01350
Unannotated protein.
  
  
 0.800
GCA_000384075_01543
Unannotated protein.
 
  
 0.798
Your Current Organism:
Methylovulum miyakonense
NCBI taxonomy Id: 1078846
Other names: M. miyakonense HT12, Methylococcaceae bacterium HT12, Methylovulum miyakonense HT12, Methylovulum miyakonense str. HT12, Methylovulum miyakonense strain HT12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.