STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384075_02234Unannotated protein. (150 aa)    
Predicted Functional Partners:
GCA_000384075_03181
Unannotated protein.
   
 
 0.720
GCA_000384075_03744
Unannotated protein.
   
 
 0.720
GCA_000384075_04131
Unannotated protein.
   
 
 0.720
GCA_000384075_03094
Unannotated protein.
  
  
  0.691
GCA_000384075_01818
Unannotated protein.
     
 0.677
GCA_000384075_01583
Unannotated protein.
   
   0.642
GCA_000384075_02455
Unannotated protein.
   
   0.642
GCA_000384075_03871
Unannotated protein.
   
   0.642
GCA_000384075_02236
Unannotated protein.
 
    0.614
GCA_000384075_02353
Unannotated protein.
  
     0.602
Your Current Organism:
Methylovulum miyakonense
NCBI taxonomy Id: 1078846
Other names: M. miyakonense HT12, Methylococcaceae bacterium HT12, Methylovulum miyakonense HT12, Methylovulum miyakonense str. HT12, Methylovulum miyakonense strain HT12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.