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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1099NADH dehydrogenase. (138 aa)    
Predicted Functional Partners:
BVIR_1100
Hypothetical protein.
 
     0.818
BVIR_1692
Hypothetical protein.
  
    0.779
BVIR_263
Disulfide bond formation protein B.
 
     0.571
BVIR_3051
Stringent starvation protein B.
 
   
 0.551
nqo3
NADH-quinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
     0.543
BVIR_1510
Flavinator of succinate dehydrogenase.
  
     0.532
BVIR_1406
ATP12 chaperone protein.
  
     0.512
BVIR_3199
GcrA cell cycle regulator.
  
     0.497
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
  
     0.474
BVIR_2473
Hypothetical protein.
  
     0.460
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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