Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tesB_1Acyl-CoA thioesterase 2. (288 aa)    
Predicted Functional Partners:
BVIR_2156
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.583
ubiF
2-octaprenylphenol hydroxylase.
       0.552
nudC_1
NADH pyrophosphatase; Belongs to the Nudix hydrolase family.
  
   
 0.452
katE
Catalase C; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.441
ybgC
Acyl-CoA thioester hydrolase YbgC.
     
 0.432
tme
NADP-dependent malic enzyme.
      
 0.407
fabZ_2
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
      
 0.406
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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