STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1122Polyphosphate kinase 2 (PPK2). (295 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.771
BVIR_2350
Hypothetical protein.
  
    0.664
BVIR_768
V4R domain protein.
   
    0.623
BVIR_2877
Ubp3 associated protein Bre5.
   
    0.614
BVIR_1991
Ribosomal protein S12 methylthiotransferase RimO.
   
    0.534
BVIR_336
B12 binding domain protein.
   
    0.534
gppA_2
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase.
 
  
 0.508
BVIR_2881
Cytochrome C oxidase, mono-heme subunit/FixO.
   
    0.471
hemN_1
Oxygen-independent coproporphyrinogen-III oxidase 1.
  
    0.464
hemN_2
Oxygen-independent coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.464
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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