STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtB_2Ammonia channel precursor. (487 aa)    
Predicted Functional Partners:
glnK
Nitrogen regulatory protein P-II 2; Belongs to the P(II) protein family.
 
 0.997
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.991
gltB_1
Ferredoxin-dependent glutamate synthase 1.
 
  
 0.740
glnL_2
Nitrogen regulation protein NR(II).
 
 
 0.626
pleC_1
Non-motile and phage-resistance protein.
  
 
 0.551
BVIR_2289
FeMo cofactor biosynthesis protein NifB.
  
  
 0.527
nadE_1
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.519
ftsK_1
DNA translocase FtsK.
     
 0.498
accA1_3
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
  
 0.491
gltD_1
Glutamate synthase [NADPH] small chain.
  
  
 0.471
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.