STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1172Alpha/beta hydrolase family protein. (368 aa)    
Predicted Functional Partners:
BVIR_1173
Alpha/beta hydrolase family protein.
 
 0.913
BVIR_1170
Cupin domain protein.
 
    0.897
BVIR_1238
Hypothetical protein.
    
 0.793
BVIR_1171
Carboxymuconolactone decarboxylase family protein.
 
    0.668
pfkB
Putative phosphofructokinase PfkB; Belongs to the carbohydrate kinase PfkB family.
   
    0.604
BVIR_1295
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
   
 
 0.535
mfpsA
2-deoxystreptamine glucosyltransferase.
   
 
 0.535
cotSA_2
Spore coat protein SA.
   
 
 0.535
cotSA_1
N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase.
   
 
 0.535
glgA_1
Capsular glucan synthase.
   
 
 0.535
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.