STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVIR_1297Tyrosine kinase. (722 aa)    
Predicted Functional Partners:
BVIR_1296
Polysaccharide biosynthesis/export protein.
 
 
 0.997
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.989
BVIR_1293
Hypothetical protein.
 
  
 0.922
BVIR_1295
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
 
  
 0.911
BVIR_1290
MviN-like protein.
 
  
 0.905
hoxF
NAD-reducing hydrogenase HoxS subunit alpha.
     
 0.897
capD
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
  
 0.849
BVIR_2580
Hypothetical protein.
 
   
 0.834
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.806
BVIR_1298
Hypothetical protein.
 
   
 0.801
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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