Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BVIR_1297Tyrosine kinase. (722 aa)    
Predicted Functional Partners:
BVIR_1296
Polysaccharide biosynthesis/export protein.
 
 
 0.998
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.994
BVIR_1293
Hypothetical protein.
 
  
 0.915
BVIR_1290
MviN-like protein.
 
  
 0.908
BVIR_1295
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
 
  
 0.904
BVIR_2580
Hypothetical protein.
 
   
 0.850
capD
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
  
 0.835
BVIR_1298
Hypothetical protein.
 
   
 0.810
BVIR_2202
Polysaccharide deacetylase.
 
   
 0.798
BVIR_3145
Colanic acid exporter.
 
  
 0.757
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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