Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BVIR_115 | BVIR_132 | BVIR_115 | BVIR_132 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative protoheme IX biogenesis protein. | 0.637 |
| BVIR_115 | BVIR_133 | BVIR_115 | BVIR_133 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.476 |
| BVIR_115 | BVIR_171 | BVIR_115 | BVIR_171 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.567 |
| BVIR_115 | BVIR_2182 | BVIR_115 | BVIR_2182 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor BamE. | 0.747 |
| BVIR_115 | BVIR_3081 | BVIR_115 | BVIR_3081 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.627 |
| BVIR_115 | BVIR_3216 | BVIR_115 | BVIR_3216 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.497 |
| BVIR_115 | BVIR_3220 | BVIR_115 | BVIR_3220 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA polymerase III subunit delta. | 0.551 |
| BVIR_115 | BVIR_37 | BVIR_115 | BVIR_37 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.559 |
| BVIR_132 | BVIR_115 | BVIR_132 | BVIR_115 | Putative protoheme IX biogenesis protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.637 |
| BVIR_132 | BVIR_133 | BVIR_132 | BVIR_133 | Putative protoheme IX biogenesis protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.887 |
| BVIR_132 | BVIR_171 | BVIR_132 | BVIR_171 | Putative protoheme IX biogenesis protein. | Hypothetical protein. | 0.635 |
| BVIR_132 | BVIR_2182 | BVIR_132 | BVIR_2182 | Putative protoheme IX biogenesis protein. | Outer membrane protein assembly factor BamE. | 0.725 |
| BVIR_132 | BVIR_3081 | BVIR_132 | BVIR_3081 | Putative protoheme IX biogenesis protein. | Hypothetical protein. | 0.648 |
| BVIR_132 | BVIR_3216 | BVIR_132 | BVIR_3216 | Putative protoheme IX biogenesis protein. | Hypothetical protein. | 0.731 |
| BVIR_132 | BVIR_3220 | BVIR_132 | BVIR_3220 | Putative protoheme IX biogenesis protein. | DNA polymerase III subunit delta. | 0.693 |
| BVIR_132 | BVIR_37 | BVIR_132 | BVIR_37 | Putative protoheme IX biogenesis protein. | Hypothetical protein. | 0.631 |
| BVIR_132 | gcp | BVIR_132 | BVIR_135 | Putative protoheme IX biogenesis protein. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.662 |
| BVIR_132 | hemC | BVIR_132 | BVIR_134 | Putative protoheme IX biogenesis protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.782 |
| BVIR_133 | BVIR_115 | BVIR_133 | BVIR_115 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.476 |
| BVIR_133 | BVIR_132 | BVIR_133 | BVIR_132 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Putative protoheme IX biogenesis protein. | 0.887 |
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