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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accA1_2Acetyl-/propionyl-coenzyme A carboxylase alpha chain. (651 aa)    
Predicted Functional Partners:
BVIR_1435
Methylmalonyl-CoA carboxyltransferase 12S subunit.
 0.998
BVIR_2323
Methylmalonyl-CoA carboxyltransferase 12S subunit.
 
 0.986
accD5
Putative propionyl-CoA carboxylase beta chain 5.
 
 0.985
echA8_3
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.926
echA8_1
2,3-dehydroadipyl-CoA hydratase.
  
 0.926
BVIR_1423
Acyl-CoA dehydrogenase.
  
 0.919
aidB_1
Acyl-CoA dehydrogenase.
  
 0.919
BVIR_2255
KipI antagonist.
 
  
 0.912
gatA_3
Allophanate hydrolase.
    
 0.877
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
 
 0.866
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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